Guest Houses in Shinjuku, Tokyo

5 guest houses in Shinjuku Ward, Tokyo-from ¥8,000/night. Free WiFi, kitchens, and prime access to Shinjuku Station. Check rates now and book instantly.

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Rooms and Guests2 Guests, 1 room
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Check-in
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Rooms and Guests2 Guests, 1 room
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Check-in
Fri, 09 Oct
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Check-out
Sat, 10 Oct
Rooms and Guests2 Guests, 1 room
2Filter & Sort
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2.7 mi from City Center1422 yd from Waseda University
Private ParkingFully Equipped KitchenWhole-House Rental
  • Free private parking on-site
  • Three-bedroom guest house setup
  • Fully equipped kitchen included
FromUS$ 466 /nightSelect
7.3
Very good497 total reviews
our site & Booking.com
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4.2 mi from City Center544 yd from ShowBox
Washing MachineKitchenetteMicrowave
  • In-room washing machine
  • Kitchenette in room
  • Express check-in/out
FromUS$ 72 /nightSelect
Wa No KaedeGuest house
7.4
Very good214 total reviews
our site & Booking.com
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3.5 mi from City Center637 yd from Godzilla Head
Washing MachineParking24-Hour Security
  • In-room washing machines
  • Walking distance to Samurai Museum
  • Spacious family rooms
FromUS$ 123 /nightSelect
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4.3 mi from City Center811 yd from ShowBox
KitchenetteWashing MachineBathtub
  • Kitchenette and washing machine
  • Private bathroom with bathtub
  • Steps from Yodobashi Church
FromUS$ 128 /nightSelect
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2.6 mi from City Center1638 yd from Tokyo Metropolitan Government Building
Guest KitchenIn-unit WasherFree Wi-Fi
  • Steps from Shinjuku Historical Museum
  • In-unit washer for extended stays
  • Non-smoking guest house with kitchen
FromUS$ 147 /nightSelect

Guest houses in Shinjuku Ward offer budget-friendly stays in central Tokyo, with rates typically ranging from ¥8,000 to ¥15,000 per night. Properties like Miyako Shinjuku Hotel (都-新宿-) sit near Yodobashi Church, a 23 km ride from Tokyo Haneda Airport, while J-Arc Akebonobashi places guests 500 metres from Horoku Inari Shrine and a 3-minute walk from Shinjuku Historical Museum. These self-catering accommodations come equipped with kitchens, washing machines, and free WiFi, making them practical bases for extended city exploration.

Expect functional amenities rather than luxury-air conditioning, private bathrooms, and microwaves are standard. Shinjuku Garden House / Vacation STAY 81128 features three bedrooms and free parking, appealing to families, while bmj Shinjuku Okubo includes a work desk for remote workers. Okubo and Akebonobashi districts deliver easy access to train lines and 24-hour eateries, but rooms run compact. Book early for summer and cherry-blossom season, and verify check-in times, as several properties require exact arrival schedules.